Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0390 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1300810 bp
Thymine Count
1293561 bp
Guanine Count
1313857 bp
Cytosine Count
1330395 bp
Genome Length
5250183 bp
Protein-coding Genes
4835 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa--oxalate coa-transferase | C9166_18040 | Not Available | Negative | 3671226 - 3672371 | 41673.2 |
| transporter yfdv | C9166_18045 | Not Available | Negative | 3672445 - 3673389 | 33617.9 |
| oxalyl-coa decarboxylase | C9166_18050 | Not Available | Negative | 3673459 - 3675153 | 60614.9 |
| formyl-coa--oxalate coa-transferase | C9166_18055 | Not Available | Negative | 3675207 - 3676457 | 45830.7 |
| yfdx family protein | C9166_18060 | Not Available | Negative | 3676970 - 3677602 | 22907.4 |
| lipoprotein | C9166_18065 | Not Available | Positive | 3677898 - 3678173 | 10210.5 |
| duf2545 family protein | C9166_18070 | Not Available | Negative | 3678250 - 3678492 | 8923.5 |
| lipid a biosynthesis palmitoleoyltransferase | C9166_18075 | Not Available | Positive | 3678845 - 3679765 | 35495.5 |
| membrane protein ypdk | C9166_18080 | Not Available | Positive | 3680121 - 3680192 | 2704.57 |
| glutamate--pyruvate aminotransferase alac | C9166_18085 | Not Available | Negative | 3680257 - 3681495 | 46218.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





