Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0390 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1300810 bp
Thymine Count
1293561 bp
Guanine Count
1313857 bp
Cytosine Count
1330395 bp
Genome Length
5250183 bp
Protein-coding Genes
4835 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidative damage protection protein | C9166_17110 | Not Available | Negative | 3490302 - 3490577 | 10953.2 |
| adenine dna glycosylase | C9166_17115 | Not Available | Negative | 3490605 - 3491657 | 39192.3 |
| trna (guanosine(46)-n7)-methyltransferase trmb | C9166_17120 | Not Available | Positive | 3491818 - 3492537 | 27308.9 |
| duf469 domain-containing protein | C9166_17125 | Not Available | Positive | 3492537 - 3492863 | 12881.2 |
| duf2884 family protein | C9166_17130 | Not Available | Positive | 3493047 - 3493766 | 26430.8 |
| l-asparaginase 2 | C9166_17135 | Not Available | Positive | 3493942 - 3494988 | 36851.7 |
| duf1202 family protein | C9166_17140 | Not Available | Positive | 3495105 - 3496112 | 38475.4 |
| trap transporter large permease subunit | C9166_17145 | Not Available | Negative | 3496168 - 3497469 | 45787.5 |
| trap transporter small permease | C9166_17150 | Not Available | Negative | 3497469 - 3497972 | 18360.3 |
| trap transporter substrate-binding protein | C9166_17155 | Not Available | Negative | 3498017 - 3499003 | 36560.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





