Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0390 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1300810 bp
Thymine Count
1293561 bp
Guanine Count
1313857 bp
Cytosine Count
1330395 bp
Genome Length
5250183 bp
Protein-coding Genes
4835 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator kdgr | C9166_16915 | Not Available | Positive | 3452732 - 3453523 | 29988.1 |
| hypothetical protein | C9166_16920 | Not Available | Negative | 3453666 - 3453905 | 8514.67 |
| phop/phoq regulator mgrb | C9166_16925 | Not Available | Positive | 3454064 - 3454207 | 5552.09 |
| hypothetical protein | C9166_16930 | Not Available | Positive | 3454282 - 3454569 | 10793.1 |
| duf2627 domain-containing protein | C9166_16935 | Not Available | Positive | 3455239 - 3455382 | 5212.44 |
| cold-shock protein cspc | C9166_16940 | Not Available | Positive | 3455395 - 3455604 | 7402.76 |
| 23s rrna (guanine(745)-n(1))-methyltransferase | C9166_16945 | Not Available | Positive | 3455770 - 3456579 | 30454.6 |
| manganese efflux pump mntp | C9166_16950 | Not Available | Negative | 3456576 - 3457142 | 20118.3 |
| duf986 domain-containing protein | C9166_16955 | Not Available | Negative | 3457571 - 3458029 | 17616.4 |
| pts mannose transporter subunit iid | C9166_16960 | Not Available | Negative | 3458084 - 3458935 | 30957.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





