Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0390 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1300810 bp
Thymine Count
1293561 bp
Guanine Count
1313857 bp
Cytosine Count
1330395 bp
Genome Length
5250183 bp
Protein-coding Genes
4835 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1482 family protein | C9166_16865 | Not Available | Negative | 3440520 - 3440711 | 7324.62 |
| duf1480 family protein | C9166_16870 | Not Available | Negative | 3440816 - 3441052 | 8753.26 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | C9166_16875 | Not Available | Negative | 3441170 - 3442609 | 53182.3 |
| pqib family protein | C9166_16880 | Not Available | Negative | 3442689 - 3445322 | 94976.0 |
| paraquat-inducible membrane protein a | C9166_16885 | Not Available | Negative | 3445291 - 3446574 | 48276.3 |
| gaf domain-containing protein | C9166_16890 | Not Available | Positive | 3446704 - 3447201 | 18080.5 |
| rna chaperone proq | C9166_16895 | Not Available | Positive | 3447298 - 3447996 | 25863.9 |
| carboxy terminal-processing peptidase | C9166_16900 | Not Available | Positive | 3448016 - 3450064 | 76565.2 |
| protease htpx | C9166_16905 | Not Available | Positive | 3450255 - 3451136 | 31959.3 |
| mfs transporter | C9166_16910 | Not Available | Negative | 3451182 - 3452555 | 48154.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





