Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0390 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1300810 bp
Thymine Count
1293561 bp
Guanine Count
1313857 bp
Cytosine Count
1330395 bp
Genome Length
5250183 bp
Protein-coding Genes
4835 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase sulfur acceptor subunit csde | C9166_16660 | Not Available | Positive | 3404992 - 3405435 | 15955.2 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | C9166_16665 | Not Available | Negative | 3405486 - 3406292 | 28563.6 |
| murein transglycosylase a | C9166_16670 | Not Available | Negative | 3406369 - 3407466 | 40412.9 |
| Trna-met | Not Available | Not Available | Positive | 3407675 - 3407751 | Not Available |
| duf1076 domain-containing protein | C9166_16680 | Not Available | Positive | 3407755 - 3407897 | 5089.02 |
| type iii effector | C9166_16685 | Not Available | Negative | 3408025 - 3409083 | 40010.0 |
| duf1076 domain-containing protein | C9166_16690 | Not Available | Negative | 3409162 - 3409812 | 24572.5 |
| bfpt-regulated chaperone | C9166_16695 | Not Available | Positive | 3409996 - 3410586 | 22398.7 |
| ykgj family cysteine cluster protein | C9166_16700 | Not Available | Negative | 3410573 - 3410695 | 4525.48 |
| damage-inducible protein dini | C9166_16705 | Not Available | Negative | 3410832 - 3411080 | 9435.25 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





