Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0390 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1300810 bp
Thymine Count
1293561 bp
Guanine Count
1313857 bp
Cytosine Count
1330395 bp
Genome Length
5250183 bp
Protein-coding Genes
4835 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| invasion protein | C9166_15780 | Not Available | Positive | 3229811 - 3230104 | 11103.2 |
| flhb hrpn yscu spas family protein | C9166_15785 | Not Available | Negative | 3230165 - 3230527 | 13822.5 |
| flagellar biosynthesis protein flhb | C9166_15790 | Not Available | Negative | 3230554 - 3231285 | 28473.6 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | C9166_15795 | Not Available | Negative | 3231294 - 3232061 | 28201.9 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | C9166_15800 | Not Available | Negative | 3232063 - 3232323 | 9488.89 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | C9166_15805 | Not Available | Negative | 3232333 - 3232998 | 24526.4 |
| yscq/hrcq family type iii secretion apparatus protein | C9166_15810 | Not Available | Negative | 3232988 - 3233560 | 21965.1 |
| hypothetical protein | C9166_15815 | Not Available | Negative | 3233570 - 3233935 | 13720.6 |
| hypothetical protein | C9166_15820 | Not Available | Negative | 3234067 - 3235677 | 60429.6 |
| Trna-gly | Not Available | Not Available | Positive | 3235911 - 3235984 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





