Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0390 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1300810 bp
Thymine Count
1293561 bp
Guanine Count
1313857 bp
Cytosine Count
1330395 bp
Genome Length
5250183 bp
Protein-coding Genes
4835 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ymia family putative membrane protein | C9166_14740 | Not Available | Negative | 3033519 - 3033647 | 4866.05 |
| hth-type transcriptional regulator cysb | C9166_14745 | Not Available | Negative | 3033978 - 3034952 | 36152.5 |
| type i dna topoisomerase | C9166_14750 | Not Available | Negative | 3035162 - 3037759 | 97283.0 |
| duf2498 family protein | C9166_14755 | Not Available | Positive | 3038139 - 3038390 | 9386.17 |
| protease | C9166_14760 | Not Available | Negative | 3038426 - 3039475 | 39368.7 |
| ycik family oxidoreductase | C9166_14765 | Not Available | Positive | 3039695 - 3040453 | 27947.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | C9166_14770 | Not Available | Positive | 3040450 - 3041040 | 22014.2 |
| 23s rrna pseudouridylate synthase b | C9166_14775 | Not Available | Negative | 3041080 - 3041952 | 32599.3 |
| threonylcarbamoyl-amp synthase | C9166_14780 | Not Available | Negative | 3042053 - 3042673 | 23213.2 |
| 5'-3' exoribonuclease | C9166_14785 | Not Available | Negative | 3042670 - 3043551 | 32581.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





