Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0390 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1300810 bp
Thymine Count
1293561 bp
Guanine Count
1313857 bp
Cytosine Count
1330395 bp
Genome Length
5250183 bp
Protein-coding Genes
4835 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter atp-binding protein sapd | C9166_14640 | Not Available | Positive | 3015180 - 3016172 | 37662.9 |
| peptide abc transporter atp-binding protein sapf | C9166_14645 | Not Available | Positive | 3016174 - 3016980 | 30572.5 |
| duf559 domain-containing protein | C9166_14650 | Not Available | Positive | 3017048 - 3017401 | 14040.7 |
| enoyl-acp reductase fabi | C9166_14655 | Not Available | Positive | 3017769 - 3018557 | 27865.5 |
| cmd domain-containing protein | C9166_14660 | Not Available | Positive | 3018702 - 3019829 | 42074.0 |
| exoribonuclease 2 | C9166_14665 | Not Available | Positive | 3019897 - 3021831 | 72494.8 |
| hypothetical protein | C9166_14670 | Not Available | Negative | 3021909 - 3022013 | 4122.21 |
| cyclic di-gmp phosphodiesterase | C9166_14675 | Not Available | Positive | 3022067 - 3024052 | 74696.3 |
| hypothetical protein | C9166_14680 | Not Available | Positive | 3024199 - 3024372 | 6441.71 |
| deor/glpr transcriptional regulator | C9166_14685 | Not Available | Positive | 3024462 - 3025211 | 27590.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





