Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0390 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1300810 bp
Thymine Count
1293561 bp
Guanine Count
1313857 bp
Cytosine Count
1330395 bp
Genome Length
5250183 bp
Protein-coding Genes
4835 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class ii glutamine amidotransferase | C9166_11860 | Not Available | Positive | 2440437 - 2441204 | 28637.2 |
| murein l,d-transpeptidase | C9166_11865 | Not Available | Negative | 2441175 - 2441915 | 28022.8 |
| type ii toxin-antitoxin system mrna interferase toxin yafq | C9166_11870 | Not Available | Negative | 2442071 - 2442349 | 10801.2 |
| type ii toxin-antitoxin system antitoxin dinj | C9166_11875 | Not Available | Negative | 2442352 - 2442612 | 9392.3 |
| peptidoglycan endopeptidase | C9166_11880 | Not Available | Positive | 2442798 - 2443571 | 29736.5 |
| type ii toxin-antitoxin system hicb family antitoxin | C9166_11885 | Not Available | Negative | 2443628 - 2443984 | 13400.8 |
| type ii toxin-antitoxin system hica family toxin | C9166_11890 | Not Available | Negative | 2443977 - 2444255 | 10187.3 |
| flagellar type iii secretion system protein flha | C9166_11895 | Not Available | Negative | 2444360 - 2446099 | 63193.1 |
| putative lateral flagellar export/assembly protein lafu | C9166_11900 | Not Available | Positive | 2446059 - 2446829 | 28386.2 |
| dna polymerase iv | C9166_11905 | Not Available | Positive | 2446900 - 2447955 | 39491.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





