Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0379 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1337578 bp
Thymine Count
1331621 bp
Guanine Count
1347838 bp
Cytosine Count
1352021 bp
Genome Length
5382183 bp
Protein-coding Genes
4937 genes
Non-Coding Genes
453 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | C9155_19005 | Not Available | Positive | 3851370 - 3851756 | 15121.1 |
| hth-type transcriptional activator rhar | C9155_19010 | Not Available | Positive | 3851740 - 3852678 | 35632.4 |
| l-rhamnose/proton symporter rhat | C9155_19015 | Not Available | Negative | 3852675 - 3853709 | 37318.1 |
| superoxide dismutase | C9155_19020 | Not Available | Positive | 3853994 - 3854614 | 23080.2 |
| 2-keto-3-deoxygluconate permease | C9155_19025 | Not Available | Positive | 3854874 - 3855857 | 33671.4 |
| 6-n-hydroxylaminopurine resistance protein | C9155_19030 | Not Available | Positive | 3856006 - 3856680 | 25346.1 |
| two-component sensor histidine kinase | C9155_19035 | Not Available | Negative | 3856822 - 3858195 | 51627.3 |
| envelope stress response regulator transcription factor cpxr | C9155_19040 | Not Available | Negative | 3858192 - 3858890 | 26313.7 |
| periplasmic protein cpxp | C9155_19045 | Not Available | Positive | 3859040 - 3859540 | 18966.4 |
| cation-efflux pump fief | C9155_19050 | Not Available | Positive | 3859689 - 3860591 | 32929.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





