Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0379 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1337578 bp
Thymine Count
1331621 bp
Guanine Count
1347838 bp
Cytosine Count
1352021 bp
Genome Length
5382183 bp
Protein-coding Genes
4937 genes
Non-Coding Genes
453 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hila family transcriptional regulator ygeh | C9155_17355 | Not Available | Positive | 3542199 - 3543575 | 52722.8 |
| hypothetical protein | C9155_17360 | Not Available | Positive | 3543743 - 3543961 | 8055.23 |
| lytic transglycosylase domain-containing protein | C9155_17365 | Not Available | Positive | 3544044 - 3544520 | 18266.5 |
| hypothetical protein | C9155_17375 | Not Available | Negative | 3545418 - 3545627 | 8151.46 |
| type iii secretion apparatus protein orga/mxik | C9155_17390 | Not Available | Negative | 3546066 - 3546647 | 22782.7 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | C9155_17395 | Not Available | Negative | 3546663 - 3547397 | 27576.6 |
| hypothetical protein | C9155_17400 | Not Available | Negative | 3547438 - 3547725 | 10796.7 |
| prgh/eprh family type iii secretion apparatus protein | C9155_17410 | Not Available | Negative | 3547999 - 3549180 | 45220.7 |
| luxr family transcriptional regulator | C9155_17415 | Not Available | Positive | 3549438 - 3549869 | 16315.7 |
| invasion protein | C9155_17420 | Not Available | Positive | 3549940 - 3550233 | 11103.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





