Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0379 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1337578 bp
Thymine Count
1331621 bp
Guanine Count
1347838 bp
Cytosine Count
1352021 bp
Genome Length
5382183 bp
Protein-coding Genes
4937 genes
Non-Coding Genes
453 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tat-linked quality control protein tatd | C9155_15385 | Not Available | Positive | 3160378 - 3161160 | 29061.7 |
| transcription/translation regulatory transformer protein rfah | C9155_15390 | Not Available | Negative | 3161157 - 3161645 | 18341.3 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | C9155_15395 | Not Available | Positive | 3161812 - 3163305 | 55606.8 |
| nad(p)h-flavin reductase | C9155_15400 | Not Available | Positive | 3163351 - 3164052 | 26243.5 |
| acetyl-coa c-acyltransferase fada | C9155_15405 | Not Available | Negative | 3164244 - 3165407 | 40848.6 |
| fatty acid oxidation complex subunit alpha fadb | C9155_15410 | Not Available | Negative | 3165417 - 3167606 | 79597.5 |
| xaa-pro dipeptidase | C9155_15415 | Not Available | Positive | 3167796 - 3169127 | 50178.9 |
| impact family member yigz | C9155_15420 | Not Available | Positive | 3169127 - 3169741 | 21758.1 |
| trk system potassium uptake protein trkh | C9155_15425 | Not Available | Positive | 3169780 - 3171231 | 52962.9 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | C9155_15430 | Not Available | Positive | 3171243 - 3171788 | 21257.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





