Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0379 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1337578 bp
Thymine Count
1331621 bp
Guanine Count
1347838 bp
Cytosine Count
1352021 bp
Genome Length
5382183 bp
Protein-coding Genes
4937 genes
Non-Coding Genes
453 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metalloprotease | C9155_10160 | Not Available | Negative | 2100895 - 2101659 | 26768.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | C9155_10165 | Not Available | Negative | 2101828 - 2103111 | 46098.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | C9155_10170 | Not Available | Negative | 2103182 - 2104270 | 39842.6 |
| duf421 domain-containing protein | C9155_10175 | Not Available | Negative | 2104469 - 2105161 | 26283.6 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | C9155_10180 | Not Available | Positive | 2105291 - 2107051 | 65655.0 |
| formate transporter foca | C9155_10185 | Not Available | Positive | 2107457 - 2108314 | 30992.6 |
| formate acetyltransferase 1 | C9155_10190 | Not Available | Positive | 2108369 - 2110651 | 85362.0 |
| pyruvate formate lyase 1-activating protein | C9155_10195 | Not Available | Positive | 2110843 - 2111583 | 28205.9 |
| nad(p)h oxidoreductase | C9155_10200 | Not Available | Negative | 2111665 - 2112255 | 23013.3 |
| lysr family transcriptional regulator | C9155_10205 | Not Available | Positive | 2112355 - 2113263 | 34188.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





