Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0378 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1320283 bp
Thymine Count
1315306 bp
Guanine Count
1332085 bp
Cytosine Count
1338956 bp
Genome Length
5318616 bp
Protein-coding Genes
4816 genes
Non-Coding Genes
459 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel abc transporter, nickel/metallophore periplasmic binding protein | C9154_02635 | Not Available | Positive | 554830 - 556404 | 58791.3 |
| nickel abc transporter permease subunit nikb | C9154_02640 | Not Available | Positive | 556404 - 557348 | 35250.3 |
| nickel abc transporter permease subunit nikc | C9154_02645 | Not Available | Positive | 557345 - 558178 | 30294.7 |
| nickel import atp-binding protein nikd | C9154_02650 | Not Available | Positive | 558178 - 558942 | 26833.2 |
| nickel import atp-binding protein nike | C9154_02655 | Not Available | Positive | 558939 - 559745 | 29688.4 |
| nickel-responsive transcriptional regulator nikr | C9154_02660 | Not Available | Positive | 559751 - 560152 | 15094.7 |
| type ii toxin-antitoxin system hicb family antitoxin | C9154_02665 | Not Available | Negative | 560272 - 560631 | 13403.0 |
| type ii toxin-antitoxin system hica family toxin | C9154_02670 | Not Available | Negative | 560628 - 560903 | 10200.5 |
| inner membrane transport permease yhhj | C9154_02675 | Not Available | Negative | 561002 - 562126 | 41064.2 |
| abc transporter atp-binding protein/permease | C9154_02680 | Not Available | Negative | 562126 - 564861 | 100775.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





