Escherichia coli strain FWSEC0378

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0378 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. This strain is motile, possessing flagella, and typically arranges itself in pairs or as single cells. It is classified as mesophilic, with an optimal growth temperature of 37°C. FWSEC0378 is host-associated and demonstrates a significant biotic relationship, being free-living. Its host range is extensive, including various species such as Homo sapiens, Gallus gallus, Bos taurus, and multiple other vertebrates and invertebrates, highlighting its adaptability and potential for cross-species transmission. The pathogenicity of this strain is notable, as it is linked to a wide range of health effects in humans and animals. It is commonly associated with urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). The strain's involvement in foodborne infections and its potential to cause severe gastrointestinal diseases underscores its significance in public health. The diverse array of hosts and the associated health effects signify the ecological versatility of E. coli strain FWSEC0378. Its ability to infect numerous species, including humans and livestock, suggests that it plays a complex role in both the microbiome and the epidemiology of infectious diseases, emphasizing the need for ongoing surveillance and research to understand its impact on health and disease across different organisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0378

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0378
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0378 plasmid unnamed6

Gene Summary

Adenine Count

1320283 bp

Thymine Count

1315306 bp

Guanine Count

1332085 bp

Cytosine Count

1338956 bp

Genome Length

5318616 bp

Protein-coding Genes

4816 genes

Non-Coding Genes

459 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
energy-dependent translational throttle protein ettaC9154_19980Not AvailableNegative4080956 - 408262362446.5
murein transglycosylaseC9154_19985Not AvailablePositive4082834 - 408477173371.1
trp operon repressorC9154_19990Not AvailablePositive4084861 - 408518712355.9
non-canonical purine ntp phosphataseC9154_19995Not AvailableNegative4085229 - 408574118203.6
phosphoglycerate mutase gpmbC9154_20000Not AvailablePositive4085793 - 408644024066.7
right origin-binding proteinC9154_20005Not AvailableNegative4086437 - 408730633146.8
protein creaC9154_20010Not AvailablePositive4087518 - 408799117108.8
two-component system response regulator crebC9154_20015Not AvailablePositive4088004 - 408869326142.7
cell envelope integrity protein credC9154_20025Not AvailablePositive4090175 - 409152749981.0
two-component system response regulator arcaC9154_20030Not AvailableNegative4091587 - 409230327293.6

Displaying genes 4121 – 4130 of 5279 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total