Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0378 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1320283 bp
Thymine Count
1315306 bp
Guanine Count
1332085 bp
Cytosine Count
1338956 bp
Genome Length
5318616 bp
Protein-coding Genes
4816 genes
Non-Coding Genes
459 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9154_17475 | Not Available | Positive | 3553393 - 3553734 | 12553.0 |
| yiab family inner membrane protein | C9154_17480 | Not Available | Positive | 3553780 - 3554217 | 16123.6 |
| acyltransferase | C9154_17485 | Not Available | Negative | 3554259 - 3555254 | 37558.0 |
| hypothetical protein | C9154_17490 | Not Available | Positive | 3555429 - 3555728 | 11324.8 |
| glycine--trna ligase subunit alpha | C9154_17495 | Not Available | Positive | 3555823 - 3556734 | 34718.2 |
| glycine--trna ligase subunit beta | C9154_17500 | Not Available | Positive | 3556744 - 3558813 | 76787.2 |
| type i toxin-antitoxin system toxin hoka | C9154_17505 | Not Available | Positive | 3559139 - 3559291 | 5912.47 |
| cold-shock protein | C9154_17510 | Not Available | Negative | 3559479 - 3559691 | 7403.66 |
| hth-type transcriptional regulator | C9154_17515 | Not Available | Negative | 3559972 - 3560262 | 11033.5 |
| duf3053 domain-containing protein | C9154_17520 | Not Available | Positive | 3560696 - 3561406 | 25678.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





