Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0378 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1320283 bp
Thymine Count
1315306 bp
Guanine Count
1332085 bp
Cytosine Count
1338956 bp
Genome Length
5318616 bp
Protein-coding Genes
4816 genes
Non-Coding Genes
459 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf202 domain-containing protein | C9154_15100 | Not Available | Negative | 3090633 - 3090995 | 13769.1 |
| duf202 domain-containing protein | C9154_15105 | Not Available | Negative | 3090985 - 3091332 | 12780.1 |
| atp-dependent rna helicase rhle | C9154_15110 | Not Available | Negative | 3091698 - 3093062 | 49939.4 |
| dna-binding transcriptional regulator cecr | C9154_15115 | Not Available | Positive | 3093291 - 3093962 | 25018.1 |
| secretion protein hlyd | C9154_15120 | Not Available | Positive | 3093965 - 3094960 | 36273.7 |
| abc transporter atp-binding protein | C9154_15125 | Not Available | Positive | 3094953 - 3096689 | 63136.3 |
| inner membrane transport permease ybhs | C9154_15130 | Not Available | Positive | 3096682 - 3097815 | 42062.4 |
| inner membrane transport permease ybhr | C9154_15135 | Not Available | Positive | 3097826 - 3098932 | 41568.2 |
| hypothetical protein | C9154_15140 | Not Available | Negative | 3098894 - 3099304 | 15465.6 |
| endonuclease/exonuclease/phosphatase family protein | C9154_15145 | Not Available | Positive | 3099437 - 3100198 | 28791.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





