Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0378 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1320283 bp
Thymine Count
1315306 bp
Guanine Count
1332085 bp
Cytosine Count
1338956 bp
Genome Length
5318616 bp
Protein-coding Genes
4816 genes
Non-Coding Genes
459 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system chpb family toxin | C9154_13215 | Not Available | Negative | 2717996 - 2718346 | 12512.2 |
| antitoxin chps | C9154_13220 | Not Available | Negative | 2718340 - 2718591 | 9302.15 |
| gamma-glutamylcyclotransferase ytfp | C9154_13225 | Not Available | Negative | 2718803 - 2719144 | 12867.2 |
| autotransporter assembly complex protein tamb | C9154_13230 | Not Available | Negative | 2719147 - 2722926 | 136919.0 |
| autotransporter assembly complex protein tama | C9154_13235 | Not Available | Negative | 2722923 - 2724656 | 64799.7 |
| peptide-methionine (s)-s-oxide reductase msra | C9154_13240 | Not Available | Positive | 2724862 - 2725500 | 23316.3 |
| hlyc/corc family transporter | C9154_13245 | Not Available | Positive | 2725823 - 2727166 | 49765.6 |
| duf1107 domain-containing protein | C9154_13250 | Not Available | Negative | 2727228 - 2727434 | 8072.24 |
| ytfj family protein | C9154_13255 | Not Available | Positive | 2727759 - 2728316 | 20617.9 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | C9154_13260 | Not Available | Negative | 2728306 - 2729046 | 27191.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





