Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0378 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1320283 bp
Thymine Count
1315306 bp
Guanine Count
1332085 bp
Cytosine Count
1338956 bp
Genome Length
5318616 bp
Protein-coding Genes
4816 genes
Non-Coding Genes
459 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | C9154_12475 | Not Available | Negative | 2563560 - 2564411 | 32034.2 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | C9154_12480 | Not Available | Negative | 2564413 - 2565879 | 53030.7 |
| 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase | C9154_12485 | Not Available | Negative | 2565876 - 2567165 | 47126.0 |
| homoprotocatechuate degradative operon repressor | C9154_12490 | Not Available | Positive | 2567437 - 2567883 | 17255.8 |
| methyl-accepting chemotaxis protein | C9154_12495 | Not Available | Positive | 2568002 - 2569666 | 59813.9 |
| l-galactonate transporter | C9154_12500 | Not Available | Negative | 2569715 - 2571076 | 49429.4 |
| gntr family transcriptional regulator | C9154_12505 | Not Available | Negative | 2571291 - 2572205 | 35390.1 |
| zinc-binding alcohol dehydrogenase family protein | C9154_12510 | Not Available | Positive | 2572344 - 2573366 | 36436.0 |
| phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | C9154_12515 | Not Available | Negative | 2573505 - 2575796 | 85528.7 |
| duf2501 domain-containing protein | C9154_12520 | Not Available | Negative | 2576050 - 2576544 | 17385.7 |
Pathways
983 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





