Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0378 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1320283 bp
Thymine Count
1315306 bp
Guanine Count
1332085 bp
Cytosine Count
1338956 bp
Genome Length
5318616 bp
Protein-coding Genes
4816 genes
Non-Coding Genes
459 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-amino acid dehydrogenase | C9154_07830 | Not Available | Positive | 1622812 - 1624110 | 47610.1 |
| alanine racemase | C9154_07835 | Not Available | Positive | 1624120 - 1625190 | 38872.9 |
| k+/h+ antiporter nhap2 | C9154_07840 | Not Available | Negative | 1625577 - 1627313 | 62209.1 |
| muramoyltetrapeptide carboxypeptidase | C9154_07845 | Not Available | Negative | 1627408 - 1628322 | 33673.6 |
| murein transglycosylase | C9154_07850 | Not Available | Positive | 1628422 - 1629033 | 22213.7 |
| glsb/yeaq/ymge family stress response membrane protein | C9154_07860 | Not Available | Positive | 1629969 - 1630223 | 8703.27 |
| hypothetical protein | C9154_07865 | Not Available | Positive | 1630401 - 1630841 | 16695.8 |
| trehalase | C9154_07870 | Not Available | Negative | 1630920 - 1632617 | 63674.1 |
| dihydroxyacetone kinase subunit dham | C9154_07875 | Not Available | Negative | 1632937 - 1634355 | 51450.6 |
| dihydroxyacetone kinase subunit l | C9154_07880 | Not Available | Negative | 1634366 - 1634998 | 22702.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





