Escherichia coli strain FWSEC0378

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0378 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. This strain is motile, possessing flagella, and typically arranges itself in pairs or as single cells. It is classified as mesophilic, with an optimal growth temperature of 37°C. FWSEC0378 is host-associated and demonstrates a significant biotic relationship, being free-living. Its host range is extensive, including various species such as Homo sapiens, Gallus gallus, Bos taurus, and multiple other vertebrates and invertebrates, highlighting its adaptability and potential for cross-species transmission. The pathogenicity of this strain is notable, as it is linked to a wide range of health effects in humans and animals. It is commonly associated with urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). The strain's involvement in foodborne infections and its potential to cause severe gastrointestinal diseases underscores its significance in public health. The diverse array of hosts and the associated health effects signify the ecological versatility of E. coli strain FWSEC0378. Its ability to infect numerous species, including humans and livestock, suggests that it plays a complex role in both the microbiome and the epidemiology of infectious diseases, emphasizing the need for ongoing surveillance and research to understand its impact on health and disease across different organisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0378

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0378
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0378 plasmid unnamed6

Gene Summary

Adenine Count

1320283 bp

Thymine Count

1315306 bp

Guanine Count

1332085 bp

Cytosine Count

1338956 bp

Genome Length

5318616 bp

Protein-coding Genes

4816 genes

Non-Coding Genes

459 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Baseplate wedge subunitC9154_16925Not AvailableNegative3443428 - 344377512638.3
Baseplate proteinC9154_16930Not AvailableNegative3443772 - 344440722194.5
Tail completion proteinC9154_16935Not AvailableNegative3444474 - 344492617227.9
Tail completion proteinC9154_16940Not AvailableNegative3444919 - 344538617396.8
LyscC9154_16945Not AvailableNegative3445349 - 34455226158.16
LysinC9154_16950Not AvailableNegative3445494 - 344591915817.0
HolinC9154_16955Not AvailableNegative3445907 - 344633215621.8
EndolysinC9154_16960Not AvailableNegative3446347 - 344684418529.1
HolinC9154_16965Not AvailableNegative3446844 - 34471259818.63
Tail proteinC9154_16970Not AvailableNegative3447129 - 34473327081.48

Displaying genes 151 – 160 of 5279 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total