Escherichia coli strain FWSEC0344

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0344 is a Gram-negative, rod-shaped bacterium that displays mobility due to the presence of flagella. It is a facultative anaerobe, capable of thriving in both aerobic and anaerobic conditions, with an optimal growth temperature of 37°C, placing it firmly within the mesophilic temperature range. This strain is associated with a diverse range of hosts, including humans (Homo sapiens), various mammals such as cattle (Bos taurus), pigs (Sus scrofa), and species from other vertebrate classes like birds (Aves) and reptiles (Python regius), as well as plants such as Solanum lycopersicum and Brassica oleracea var. italica. FWSEC0344 exhibits a free-living biotic relationship, which suggests its ability to survive independently of a host organism while still being capable of causing infections. It is implicated in numerous health effects, including urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and various forms of colitis and sepsis. These pathogenic effects can lead to serious conditions such as hemolytic uremic syndrome (HUS), renal failure, and even neonatal mortality. The diverse range of hosts and the strain's pathogenic capabilities highlight its ecological versatility and potential for transmission between various species. This adaptability emphasizes the importance of monitoring E. coli strains like FWSEC0344 in both clinical and agricultural settings, as they can pose significant health risks not only to humans but also to animals and plants. Understanding the behaviors and interactions of such strains can provide insights into infection control and prevention strategies in public health and veterinary contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0344

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0344
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0344


Gene Summary

Adenine Count

1242889 bp

Thymine Count

1234185 bp

Guanine Count

1255227 bp

Cytosine Count

1263439 bp

Genome Length

5006345 bp

Protein-coding Genes

4575 genes

Non-Coding Genes

237 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1480 family proteinC9120_03420Not AvailablePositive710856 - 7110928753.26
duf1482 family proteinC9120_03425Not AvailablePositive711197 - 7113887324.62
protein-serine/threonine phosphataseC9120_03430Not AvailableNegative711389 - 71204525287.3
duf2511 domain-containing proteinC9120_03435Not AvailableNegative712441 - 71278212379.2
copper resistance d family proteinC9120_03440Not AvailableNegative712795 - 71366732528.3
copc domain-containing protein yobaC9120_03445Not AvailableNegative713671 - 71404513410.9
dna polymerase iii subunit thetaC9120_03450Not AvailablePositive714184 - 7144148846.79
carbon-nitrogen hydrolase family proteinC9120_03455Not AvailablePositive714516 - 71517224397.4
exodeoxyribonuclease xC9120_03460Not AvailablePositive715196 - 71585825134.5
oligopeptidase bC9120_03465Not AvailableNegative715855 - 71791579434.6

Displaying genes 821 – 830 of 4838 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

136 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm00007052-dehydro-3-deoxy-D-arabinonateC5H7O5Chemical structure of 2-dehydro-3-deoxy-D-arabinonateNot available
Average147.107Da
Monoisotopic147.0298969Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da

Displaying 1–10 of 136 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total