Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0344 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1242889 bp
Thymine Count
1234185 bp
Guanine Count
1255227 bp
Cytosine Count
1263439 bp
Genome Length
5006345 bp
Protein-coding Genes
4575 genes
Non-Coding Genes
237 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional (p)ppgpp synthetase ii/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | C9120_22130 | Not Available | Positive | 4475223 - 4477331 | 79347.1 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | C9120_22135 | Not Available | Positive | 4477338 - 4478027 | 25345.6 |
| atp-dependent dna helicase recg | C9120_22140 | Not Available | Positive | 4478033 - 4480114 | 76496.2 |
| hypothetical protein | C9120_22145 | Not Available | Negative | 4480099 - 4480965 | 33220.7 |
| sodium/glutamate symport carrier protein | C9120_22150 | Not Available | Negative | 4480968 - 4482173 | 42427.9 |
| xanthine permease xanp | C9120_22155 | Not Available | Positive | 4482453 - 4483844 | 48871.2 |
| asma family protein | C9120_22160 | Not Available | Positive | 4483965 - 4485674 | 62318.9 |
| alpha-xylosidase | C9120_22165 | Not Available | Negative | 4485727 - 4488045 | 88028.9 |
| inner membrane symporter yicj | C9120_22170 | Not Available | Negative | 4488055 - 4489437 | 50951.4 |
| Trna-sec(p) | Not Available | Not Available | Positive | 4489730 - 4489820 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





