Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0344 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1242889 bp
Thymine Count
1234185 bp
Guanine Count
1255227 bp
Cytosine Count
1263439 bp
Genome Length
5006345 bp
Protein-coding Genes
4575 genes
Non-Coding Genes
237 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-xylose abc transporter substrate-binding protein | C9120_19650 | Not Available | Negative | 4028339 - 4029331 | 35764.2 |
| xylose isomerase | C9120_19655 | Not Available | Positive | 4029697 - 4031019 | 49691.7 |
| xylulokinase | C9120_19660 | Not Available | Positive | 4031091 - 4032545 | 52681.4 |
| hypothetical protein | C9120_19665 | Not Available | Positive | 4032714 - 4033055 | 12569.0 |
| yiab family inner membrane protein | C9120_19670 | Not Available | Positive | 4033101 - 4033580 | 17899.8 |
| hexuronate transporter | C9120_19680 | Not Available | Negative | 4034436 - 4035734 | 46881.0 |
| glucuronate isomerase | C9120_19685 | Not Available | Positive | 4036217 - 4037629 | 54004.2 |
| altronate dehydratase | C9120_19690 | Not Available | Positive | 4037644 - 4039131 | 54126.2 |
| ygjv family protein | C9120_19695 | Not Available | Positive | 4039214 - 4039765 | 20576.8 |
| serine/threonine transporter sstt | C9120_19700 | Not Available | Negative | 4039770 - 4041014 | 43480.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





