Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0341 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1240993 bp
Thymine Count
1234827 bp
Guanine Count
1257917 bp
Cytosine Count
1259257 bp
Genome Length
5003524 bp
Protein-coding Genes
4578 genes
Non-Coding Genes
220 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system membrane subunit tssm | C9117_22245 | Not Available | Positive | 4505725 - 4509159 | 130792.0 |
| hcp family type vi secretion system effector | C9117_22260 | Not Available | Positive | 4510546 - 4511028 | 18000.5 |
| hypothetical protein | C9117_22265 | Not Available | Positive | 4511072 - 4511986 | 34023.4 |
| hypothetical protein | C9117_22275 | Not Available | Negative | 4512611 - 4513396 | 29620.3 |
| Trna-asp | Not Available | Not Available | Positive | 4513726 - 4513802 | Not Available |
| dna polymerase iii subunit epsilon | C9117_22285 | Not Available | Negative | 4513935 - 4514666 | 27101.5 |
| ribonuclease hi | C9117_22290 | Not Available | Positive | 4514731 - 4515198 | 17597.9 |
| sam-dependent methyltransferase | C9117_22295 | Not Available | Negative | 4515195 - 4515917 | 27295.7 |
| hydroxyacylglutathione hydrolase | C9117_22300 | Not Available | Positive | 4515951 - 4516706 | 28387.8 |
| murein transglycosylase d | C9117_22305 | Not Available | Positive | 4516778 - 4518136 | 49420.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





