Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0341 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1240993 bp
Thymine Count
1234827 bp
Guanine Count
1257917 bp
Cytosine Count
1259257 bp
Genome Length
5003524 bp
Protein-coding Genes
4578 genes
Non-Coding Genes
220 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtw domain-containing protein yfip | C9117_21380 | Not Available | Negative | 4339964 - 4340662 | 25996.5 |
| thioredoxin trxc | C9117_21385 | Not Available | Negative | 4340731 - 4341150 | 15439.5 |
| methyltransferase | C9117_21390 | Not Available | Positive | 4341357 - 4342394 | 37786.5 |
| uracil-dna glycosylase | C9117_21395 | Not Available | Negative | 4342442 - 4343131 | 25663.6 |
| autonomous glycyl radical cofactor grca | C9117_21400 | Not Available | Positive | 4343436 - 4343819 | 14285.0 |
| cysteine/o-acetylserine transporter | C9117_21405 | Not Available | Negative | 4343875 - 4344462 | 21219.5 |
| lysr family transcriptional regulator | C9117_21410 | Not Available | Positive | 4344565 - 4345446 | 33301.3 |
| atp-dependent rna helicase srmb | C9117_21415 | Not Available | Negative | 4345655 - 4346989 | 49931.0 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase | C9117_21420 | Not Available | Positive | 4347121 - 4347858 | 27199.3 |
| l-aspartate oxidase | C9117_21425 | Not Available | Negative | 4347843 - 4349465 | 60206.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





