Escherichia coli strain FWSEC0341

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0341 is a Gram-negative, rod-shaped bacterium that is facultatively anaerobic and capable of mobility due to the presence of flagella. It is primarily host-associated, exhibiting a free-living biotic relationship. The optimal growth temperature for this strain is 37°C, placing it within the mesophilic temperature range. It possesses one replicon and two membranes. This strain has a wide range of known hosts, including Homo sapiens, various mammals (e.g., Gallus gallus, Bos taurus, Sus scrofa), and even some plants like Solanum lycopersicum and Brassica oleracea var. italica. This broad host range suggests that FWSEC0341 may play diverse roles in different ecological niches. FWSEC0341 is notable for its pathogenicity in humans, associated with a range of serious health effects. It is linked to urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and various other conditions such as septicemia, food poisoning, and hemorrhagic colitis. The strain's involvement in both enteric diseases and urinary tract complications highlights its potential impact on public health. Given its pathogenic potential and diverse range of hosts, Escherichia coli strain FWSEC0341 illustrates the complex interactions between microorganisms and their environments. Understanding these relationships is crucial for managing infections and mitigating risks associated with this versatile strain.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0341

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0341
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0341 plasmid unnamed7

Gene Summary

Adenine Count

1240993 bp

Thymine Count

1234827 bp

Guanine Count

1257917 bp

Cytosine Count

1259257 bp

Genome Length

5003524 bp

Protein-coding Genes

4578 genes

Non-Coding Genes

220 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional nadp-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase ydfgC9117_18460Not AvailableNegative3795246 - 379599227250.5
peptidyl-dipeptidase dcpC9117_18465Not AvailablePositive3796129 - 379817477528.0
2-oxo-tetronate isomeraseC9117_18470Not AvailableNegative3798218 - 379873618321.8
ydei family stress tolerance ob fold proteinC9117_18475Not AvailablePositive3799012 - 379940414134.9
diguanylate cyclaseC9117_18480Not AvailablePositive3799659 - 380054933825.3
protein mgtsC9117_18485Not AvailableNegative3800768 - 38008633509.36
efflux mfs transporter ydeeC9117_18490Not AvailableNegative3800990 - 380217742725.6
o-acetylserine/cysteine exporterC9117_18495Not AvailablePositive3802372 - 380327132280.1
multiple antibiotic resistance protein marbC9117_18500Not AvailableNegative3803302 - 38035207527.95
mdr efflux pump acrab transcriptional activator maraC9117_18505Not AvailableNegative3803552 - 380393515171.0

Displaying genes 3641 – 3650 of 4814 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total