Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0341 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1240993 bp
Thymine Count
1234827 bp
Guanine Count
1257917 bp
Cytosine Count
1259257 bp
Genome Length
5003524 bp
Protein-coding Genes
4578 genes
Non-Coding Genes
220 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tir chaperone family protein | C9117_17805 | Not Available | Negative | 3649673 - 3650032 | 13781.4 |
| t3ss effector protein map | C9117_17810 | Not Available | Positive | 3650284 - 3650895 | 22600.2 |
| translocated intimin receptor tir | C9117_17815 | Not Available | Positive | 3651342 - 3652958 | 55424.1 |
| type iii secretion system lee chaperone cest | C9117_17820 | Not Available | Positive | 3653091 - 3653561 | 17721.9 |
| intimin | C9117_17825 | Not Available | Positive | 3653622 - 3656441 | 101648.0 |
| type iii secretion system lee inner membrane ring protein escd | C9117_17830 | Not Available | Negative | 3656656 - 3657876 | 45226.7 |
| type iii secretion system lee gatekeeper sepl | C9117_17835 | Not Available | Positive | 3658019 - 3659074 | 40007.9 |
| type iii secretion system lee translocon filament protein espa | C9117_17840 | Not Available | Positive | 3659132 - 3659710 | 20491.1 |
| secretion protein espd | C9117_17845 | Not Available | Positive | 3659723 - 3660865 | 39621.0 |
| eaeb | C9117_17850 | Not Available | Positive | 3660886 - 3661830 | 33221.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





