Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system protein traw | C9115_24030 | Not Available | Negative | 4851585 - 4852217 | 23684.7 |
| type-f conjugative transfer system protein trbi | C9115_24035 | Not Available | Negative | 4852214 - 4852600 | 14236.1 |
| type iv secretion system protein trac | C9115_24040 | Not Available | Negative | 4852597 - 4855224 | 99382.6 |
| conjugal transfer protein trar | C9115_24045 | Not Available | Negative | 4855384 - 4855605 | 8400.05 |
| type iv conjugative transfer system protein trav | C9115_24050 | Not Available | Negative | 4855740 - 4856255 | 18466.3 |
| conjugal transfer protein trbg | C9115_24055 | Not Available | Negative | 4856252 - 4856503 | 9139.82 |
| duf2689 domain-containing protein | C9115_24060 | Not Available | Negative | 4856496 - 4856864 | 13393.3 |
| conjugal transfer protein trap | C9115_24065 | Not Available | Negative | 4856803 - 4857390 | 21833.3 |
| conjugal transfer protein trab | C9115_24070 | Not Available | Negative | 4857380 - 4858810 | 50219.6 |
| type-f conjugative transfer system secretin trak | C9115_24075 | Not Available | Negative | 4858810 - 4859538 | 25707.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




