Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | C9115_22395 | Not Available | Positive | 4602654 - 4603568 | 33793.8 |
| 2,5-diketo-d-gluconic acid reductase b | C9115_22400 | Not Available | Negative | 4603565 - 4604368 | 29438.4 |
| Trna-asp | Not Available | Not Available | Positive | 4604531 - 4604607 | Not Available |
| rhs repeat protein | C9115_22525 | Not Available | Negative | 4623037 - 4624684 | 59724.0 |
| type vi secretion system tip protein vgrg | C9115_22530 | Not Available | Negative | 4624760 - 4626901 | 79794.1 |
| hcp family type vi secretion system effector | C9115_22535 | Not Available | Negative | 4627111 - 4627629 | 19256.8 |
| type vi secretion system contractile sheath small subunit | C9115_22540 | Not Available | Positive | 4628326 - 4628826 | 18062.5 |
| hypothetical protein | C9115_22545 | Not Available | Positive | 4628861 - 4629085 | 8411.01 |
| type vi secretion system contractile sheath large subunit | C9115_22550 | Not Available | Positive | 4629136 - 4630611 | 55721.1 |
| type vi secretion system baseplate subunit tsse | C9115_22555 | Not Available | Positive | 4630618 - 4631031 | 15461.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




