Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional repressor fabr | C9115_20895 | Not Available | Positive | 4308859 - 4309509 | 24550.6 |
| yijd family membrane protein | C9115_20900 | Not Available | Positive | 4309509 - 4309868 | 13024.3 |
| trna (uridine(54)-c5)-methyltransferase trma | C9115_20905 | Not Available | Negative | 4309908 - 4311008 | 41969.3 |
| tonb-dependent vitamin b12 receptor btub | C9115_20910 | Not Available | Positive | 4311377 - 4313221 | 68438.7 |
| glutamate racemase | C9115_20915 | Not Available | Positive | 4313166 - 4314023 | 31133.8 |
| hypothetical protein | C9115_20920 | Not Available | Positive | 4314116 - 4315240 | 43293.2 |
| glycosyltransferase family 2 protein | C9115_20925 | Not Available | Positive | 4315260 - 4316198 | 35858.3 |
| udp-glucose 4-epimerase gale | C9115_20930 | Not Available | Positive | 4316238 - 4317254 | 37677.9 |
| glycosyltransferase | C9115_20935 | Not Available | Positive | 4317277 - 4318335 | 40226.7 |
| nadp-dependent phosphogluconate dehydrogenase | C9115_20940 | Not Available | Positive | 4318441 - 4319847 | 51454.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




