Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system mrna interferase toxin yafq | C9115_18135 | Not Available | Negative | 3719543 - 3719821 | 10801.2 |
| type ii toxin-antitoxin system antitoxin dinj | C9115_18140 | Not Available | Negative | 3719824 - 3720084 | 9392.3 |
| peptidoglycan endopeptidase | C9115_18145 | Not Available | Positive | 3720270 - 3721043 | 29708.5 |
| type ii toxin-antitoxin system hicb family antitoxin | C9115_18150 | Not Available | Negative | 3721100 - 3721456 | 13400.8 |
| type ii toxin-antitoxin system hica family toxin | C9115_18155 | Not Available | Negative | 3721449 - 3721727 | 10187.3 |
| flagellar type iii secretion system protein flha | C9115_18160 | Not Available | Negative | 3721832 - 3723571 | 63193.1 |
| putative lateral flagellar export/assembly protein lafu | C9115_18165 | Not Available | Positive | 3723531 - 3724301 | 28466.3 |
| dna polymerase iv | C9115_18170 | Not Available | Positive | 3724372 - 3725427 | 39518.2 |
| gnat family n-acetyltransferase | C9115_18175 | Not Available | Positive | 3725424 - 3725876 | 17561.2 |
| rna ligase rtcb family protein | C9115_18180 | Not Available | Positive | 3726095 - 3727261 | 42590.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




