Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-lactate dehydrogenase | C9115_00160 | Not Available | Positive | 21855 - 23570 | 64666.0 |
| d-alanyl-d-alanine endopeptidase | C9115_00165 | Not Available | Negative | 23608 - 24540 | 33855.3 |
| yip1 family protein | C9115_00170 | Not Available | Negative | 24714 - 25301 | 21692.0 |
| deda family protein | C9115_00175 | Not Available | Positive | 25471 - 26049 | 21422.9 |
| sdr family oxidoreductase | C9115_00180 | Not Available | Negative | 26179 - 26940 | 26979.4 |
| Ncrna_class:other | Not Available | Not Available | Positive | 27699 - 27830 | Not Available |
| multidrug resistance outer membrane protein mdtq | C9115_00185 | Not Available | Negative | 26993 - 28519 | 55638.3 |
| protein yohp | C9115_00190 | Not Available | Positive | 28653 - 28736 | 3092.28 |
| trna dihydrouridine(16) synthase dusc | C9115_00195 | Not Available | Negative | 29109 - 30056 | 35125.4 |
| hypothetical protein | C9115_00200 | Not Available | Positive | 30295 - 30693 | 14579.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




