Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | C9115_16555 | Not Available | Positive | 3384885 - 3386066 | 43236.9 |
| amino acid abc transporter permease | C9115_16560 | Not Available | Positive | 3386076 - 3387179 | 41512.7 |
| amino acid abc transporter atp-binding protein | C9115_16565 | Not Available | Positive | 3387187 - 3387945 | 28594.0 |
| Trna-thr | Not Available | Not Available | Positive | 3388332 - 3388407 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 3388493 - 3388569 | Not Available |
| murein transglycosylase a | C9115_16585 | Not Available | Positive | 3388778 - 3389875 | 40412.9 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | C9115_16590 | Not Available | Positive | 3390114 - 3390920 | 28534.6 |
| cysteine desulfurase sulfur acceptor subunit csde | C9115_16595 | Not Available | Negative | 3390971 - 3391414 | 15913.1 |
| cysteine desulfurase csda | C9115_16600 | Not Available | Negative | 3391414 - 3392619 | 43278.6 |
| ygdi/ygdr family lipoprotein | C9115_16605 | Not Available | Positive | 3392811 - 3393038 | 8174.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




