Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3251 domain-containing protein | C9115_15955 | Not Available | Positive | 3254922 - 3255461 | 19633.6 |
| nucleoside-specific channel-forming protein tsx | C9115_15960 | Not Available | Positive | 3255760 - 3256644 | 33590.6 |
| hnh nuclease family protein | C9115_15965 | Not Available | Negative | 3256821 - 3257168 | 13364.7 |
| protein translocase subunit secf | C9115_15970 | Not Available | Negative | 3257297 - 3258268 | 35384.6 |
| protein translocase subunit secd | C9115_15975 | Not Available | Negative | 3258279 - 3260126 | 66636.3 |
| preprotein translocase subunit yajc | C9115_15980 | Not Available | Negative | 3260154 - 3260486 | 11887.9 |
| trna guanosine(34) transglycosylase tgt | C9115_15985 | Not Available | Negative | 3260509 - 3261636 | 42596.1 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | C9115_15990 | Not Available | Negative | 3261692 - 3262762 | 39361.0 |
| acp phosphodiesterase | C9115_15995 | Not Available | Positive | 3262855 - 3263436 | 22943.3 |
| maltodextrin glucosidase | C9115_16000 | Not Available | Negative | 3263441 - 3265258 | 69169.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




