Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe3+/spermidine/putrescine abc transporter atp-binding protein | C9115_15495 | Not Available | Positive | 3159364 - 3160500 | 43030.8 |
| spermidine/putrescine abc transporter permease potb | C9115_15500 | Not Available | Positive | 3160484 - 3161347 | 32350.4 |
| ykgj family cysteine cluster protein | C9115_15505 | Not Available | Positive | 3161513 - 3161842 | 11867.1 |
| hypothetical protein | C9115_15510 | Not Available | Negative | 3162060 - 3162619 | 19660.7 |
| abc transporter permease | C9115_15515 | Not Available | Negative | 3163049 - 3165463 | 89354.5 |
| abc transporter atp-binding protein | C9115_15520 | Not Available | Negative | 3165460 - 3166146 | 24534.5 |
| multifunctional acyl-coa thioesterase i/protease i/lysophospholipase l1 | C9115_15525 | Not Available | Positive | 3166114 - 3166740 | 23623.5 |
| sdr family oxidoreductase | C9115_15530 | Not Available | Positive | 3166730 - 3167539 | 29439.0 |
| co-chaperone ybbn | C9115_15535 | Not Available | Positive | 3167600 - 3168454 | 31747.9 |
| iron export abc transporter permease subunit fetb | C9115_15540 | Not Available | Negative | 3168517 - 3169296 | 28200.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




