Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent isocitrate dehydrogenase | C9115_15445 | Not Available | Negative | 3148486 - 3149736 | 45772.4 |
| 23s rrna pseudouridine synthase e | C9115_15450 | Not Available | Positive | 3149908 - 3150561 | 24881.8 |
| nudix hydrolase | C9115_15455 | Not Available | Positive | 3150571 - 3151032 | 17433.8 |
| trna 2-thiouridine(34) synthase mnma | C9115_15460 | Not Available | Positive | 3151086 - 3152192 | 40961.7 |
| lysogenization regulator hfld | C9115_15465 | Not Available | Positive | 3152228 - 3152869 | 22949.0 |
| adenylosuccinate lyase | C9115_15470 | Not Available | Positive | 3152873 - 3154243 | 51572.7 |
| two-component system response regulator phop | C9115_15475 | Not Available | Positive | 3154411 - 3155082 | 25536.7 |
| sensor protein phoq | C9115_15480 | Not Available | Positive | 3155082 - 3156542 | 55302.8 |
| cupin domain-containing protein | C9115_15485 | Not Available | Positive | 3156618 - 3157739 | 42581.2 |
| peptidase t | C9115_15490 | Not Available | Negative | 3157885 - 3159114 | 44985.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




