Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic diguanylate phosphodiesterase | C9115_15395 | Not Available | Negative | 3141216 - 3142739 | 56786.1 |
| hypothetical protein | C9115_15400 | Not Available | Negative | 3143071 - 3143319 | 9664.68 |
| rcsb connector protein for regulation of biofilm and acid-resistance | C9115_15405 | Not Available | Negative | 3143432 - 3143698 | 9694.59 |
| two-component-system connector protein ymga | C9115_15410 | Not Available | Negative | 3143727 - 3143999 | 10345.5 |
| two-component-system connector protein ycgz | C9115_15415 | Not Available | Negative | 3144042 - 3144278 | 8694.37 |
| blue light- and temperature-regulated antirepressor bluf | C9115_15420 | Not Available | Positive | 3144592 - 3145803 | 45297.6 |
| helix-turn-helix-type transcriptional regulator | C9115_15425 | Not Available | Positive | 3146008 - 3146739 | 28266.2 |
| duf1398 domain-containing protein | C9115_15430 | Not Available | Positive | 3146960 - 3147364 | 15770.0 |
| hypothetical protein | C9115_15435 | Not Available | Positive | 3147417 - 3147527 | 4216.47 |
| anti-adapter protein iram | C9115_15440 | Not Available | Positive | 3148060 - 3148383 | 12111.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




