Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent dna ligase ligb | C9115_14615 | Not Available | Positive | 2987850 - 2989532 | 63214.8 |
| trimeric intracellular cation channel family protein | C9115_14620 | Not Available | Negative | 2989529 - 2990146 | 22049.8 |
| dna damage-inducible protein d | C9115_14625 | Not Available | Negative | 2990437 - 2991039 | 22842.1 |
| yicc family protein | C9115_14630 | Not Available | Negative | 2991260 - 2992123 | 33160.9 |
| ribonuclease ph | C9115_14635 | Not Available | Positive | 2992250 - 2992966 | 25327.4 |
| orotate phosphoribosyltransferase | C9115_14640 | Not Available | Positive | 2993031 - 2993672 | 23568.3 |
| nucleoid occlusion factor slma | C9115_14645 | Not Available | Negative | 2993709 - 2994305 | 22837.7 |
| dutp diphosphatase | C9115_14650 | Not Available | Negative | 2994412 - 2994867 | 16157.4 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | C9115_14655 | Not Available | Negative | 2994848 - 2996068 | 43452.7 |
| jab domain-containing protein | C9115_14660 | Not Available | Positive | 2996240 - 2996908 | 25259.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




