Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-xylosidase | C9115_14565 | Not Available | Positive | 2973798 - 2976116 | 88158.1 |
| asma family protein | C9115_14570 | Not Available | Negative | 2976169 - 2977878 | 62273.9 |
| xanthine permease xanp | C9115_14575 | Not Available | Negative | 2977999 - 2979390 | 48871.2 |
| sodium/glutamate symport carrier protein | C9115_14580 | Not Available | Positive | 2979670 - 2980875 | 42445.9 |
| hypothetical protein | C9115_14585 | Not Available | Positive | 2980878 - 2981744 | 33220.7 |
| atp-dependent dna helicase recg | C9115_14590 | Not Available | Negative | 2981729 - 2983810 | 76559.2 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | C9115_14595 | Not Available | Negative | 2983816 - 2984505 | 25344.6 |
| bifunctional (p)ppgpp synthetase ii/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | C9115_14600 | Not Available | Negative | 2984512 - 2986620 | 79347.1 |
| dna-directed rna polymerase subunit omega | C9115_14605 | Not Available | Negative | 2986639 - 2986914 | 10237.2 |
| guanylate kinase | C9115_14610 | Not Available | Negative | 2986969 - 2987592 | 23594.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




