Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9115_14355 | Not Available | Negative | 2932101 - 2932757 | 24136.9 |
| transcriptional regulator | C9115_14360 | Not Available | Positive | 2933035 - 2933724 | 26081.1 |
| 2-dehydro-3-deoxygalactonokinase | C9115_14365 | Not Available | Positive | 2933721 - 2934599 | 31414.3 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | C9115_14370 | Not Available | Positive | 2934583 - 2935200 | 21418.8 |
| d-galactonate dehydratase 2 | C9115_14375 | Not Available | Positive | 2935197 - 2936345 | 42525.3 |
| mfs transporter | C9115_14380 | Not Available | Positive | 2936465 - 2937757 | 47079.4 |
| protein cbra | C9115_14385 | Not Available | Negative | 2937754 - 2938818 | 40130.6 |
| duf3748 domain-containing protein | C9115_14390 | Not Available | Positive | 2938886 - 2940133 | 46116.0 |
| ycek/yidq family lipoprotein | C9115_14395 | Not Available | Negative | 2940135 - 2940467 | 11826.3 |
| heat-shock protein ibpa | C9115_14400 | Not Available | Positive | 2940773 - 2941186 | 15774.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




