Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein cspd | C9115_14100 | Not Available | Negative | 2868191 - 2868415 | 7969.41 |
| atp-dependent clp protease adapter clps | C9115_14105 | Not Available | Positive | 2868738 - 2869058 | 12179.7 |
| atp-dependent clp protease atp-binding subunit clpa | C9115_14110 | Not Available | Positive | 2869089 - 2871365 | 84211.9 |
| Trna-ser | Not Available | Not Available | Positive | 2871768 - 2871855 | Not Available |
| translation initiation factor if-1 | C9115_14125 | Not Available | Negative | 2872109 - 2872327 | 8250.1 |
| leucyl/phenylalanyl-trna--protein transferase | C9115_14130 | Not Available | Negative | 2872612 - 2873316 | 26609.0 |
| cysteine/glutathione abc transporter atp-binding protein/permease cydc | C9115_14135 | Not Available | Negative | 2873358 - 2875079 | 62867.0 |
| atp-binding/permease cydd | C9115_14140 | Not Available | Negative | 2875080 - 2876846 | 65046.0 |
| thioredoxin reductase | C9115_14145 | Not Available | Negative | 2876969 - 2877934 | 34625.1 |
| leucine-responsive regulatory protein | C9115_14150 | Not Available | Positive | 2878479 - 2878973 | 18887.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




