Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1418 family protein | C9115_13945 | Not Available | Positive | 2836799 - 2837086 | 10551.4 |
| nitroreductase nfsa | C9115_13950 | Not Available | Positive | 2837070 - 2837792 | 26802.2 |
| 30s ribosomal protein s6--l-glutamate ligase | C9115_13955 | Not Available | Positive | 2837853 - 2838755 | 32438.5 |
| ybjn domain-containing protein | C9115_13960 | Not Available | Positive | 2838843 - 2839319 | 17667.1 |
| spermidine/putrescine abc transporter substrate-binding protein potf | C9115_13965 | Not Available | Positive | 2839670 - 2840782 | 40871.8 |
| putrescine abc transporter atp-binding subunit potg | C9115_13970 | Not Available | Positive | 2840877 - 2842010 | 42004.4 |
| putrescine abc transporter permease poth | C9115_13975 | Not Available | Positive | 2842020 - 2842973 | 35485.7 |
| putrescine abc transporter permease poti | C9115_13980 | Not Available | Positive | 2842970 - 2843815 | 30523.4 |
| duf2593 family protein | C9115_13985 | Not Available | Positive | 2843875 - 2844363 | 18519.1 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | C9115_13990 | Not Available | Positive | 2844404 - 2845531 | 41963.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




