Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome silencing factor | C9115_13440 | Not Available | Positive | 2727337 - 2727654 | 11582.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | C9115_13445 | Not Available | Positive | 2727658 - 2728125 | 17342.1 |
| penicillin-binding protein 2 | C9115_13450 | Not Available | Positive | 2728156 - 2730057 | 70860.6 |
| rod shape-determining protein roda | C9115_13455 | Not Available | Positive | 2730060 - 2731172 | 40478.6 |
| endolytic peptidoglycan transglycosylase rlpa | C9115_13460 | Not Available | Positive | 2731183 - 2732271 | 37502.0 |
| d-alanyl-d-alanine carboxypeptidase | C9115_13465 | Not Available | Positive | 2732411 - 2733622 | 44446.5 |
| duf493 family protein | C9115_13470 | Not Available | Positive | 2733733 - 2733996 | 9827.92 |
| octanoyltransferase | C9115_13475 | Not Available | Positive | 2734097 - 2734738 | 23884.0 |
| dna-binding transcriptional regulator | C9115_13480 | Not Available | Positive | 2734997 - 2735950 | 35962.5 |
| lipoyl synthase | C9115_13485 | Not Available | Positive | 2736159 - 2737124 | 36073.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




