Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1266 domain-containing protein | C9115_13385 | Not Available | Negative | 2716159 - 2716866 | 27005.8 |
| sel1 repeat family protein | C9115_13390 | Not Available | Positive | 2716967 - 2717521 | 20851.9 |
| duf1266 domain-containing protein | C9115_13400 | Not Available | Negative | 2718955 - 2719662 | 27751.6 |
| sel1 family tpr-like repeat protein ybeq | C9115_13405 | Not Available | Positive | 2719826 - 2720803 | 37098.7 |
| zinc ribbon-containing protein | C9115_13410 | Not Available | Negative | 2720873 - 2721355 | 18798.2 |
| leucine--trna ligase | C9115_13415 | Not Available | Positive | 2721590 - 2724172 | 97241.0 |
| lps assembly lipoprotein lpte | C9115_13420 | Not Available | Positive | 2724187 - 2724768 | 21357.8 |
| dna polymerase iii subunit delta | C9115_13425 | Not Available | Positive | 2724768 - 2725799 | 38702.0 |
| nicotinate-nucleotide adenylyltransferase | C9115_13430 | Not Available | Positive | 2725801 - 2726442 | 24529.3 |
| adenosylcobalamin/alpha-ribazole phosphatase | C9115_13435 | Not Available | Positive | 2726466 - 2727077 | 23353.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




