Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine decarboxylase spef | C9115_13185 | Not Available | Positive | 2677062 - 2679260 | 82559.4 |
| putrescine-ornithine antiporter | C9115_13190 | Not Available | Positive | 2679257 - 2680576 | 46497.6 |
| phosphoglucomutase | C9115_13195 | Not Available | Negative | 2680632 - 2682272 | 58396.3 |
| replication initiation negative regulator seqa | C9115_13200 | Not Available | Negative | 2682298 - 2682843 | 20316.6 |
| esterase | C9115_13205 | Not Available | Positive | 2683028 - 2683792 | 28448.9 |
| lexa regulated protein | C9115_13210 | Not Available | Positive | 2683932 - 2684225 | 11280.7 |
| flavodoxin-1 | C9115_13215 | Not Available | Positive | 2684365 - 2684895 | 19737.9 |
| fur leader peptide | C9115_13220 | Not Available | Positive | 2685105 - 2685191 | 3108.72 |
| ferric iron uptake transcriptional regulator | C9115_13225 | Not Available | Positive | 2685184 - 2685630 | 16795.8 |
| hypothetical protein | C9115_13230 | Not Available | Negative | 2685714 - 2686040 | 12017.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




