Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-galactonate dehydratase family protein | C9115_12915 | Not Available | Negative | 2634059 - 2635273 | 45971.0 |
| ynfa family protein | C9115_12920 | Not Available | Negative | 2635479 - 2635805 | 11920.2 |
| duf1283 family protein | C9115_12925 | Not Available | Positive | 2635940 - 2636281 | 12909.3 |
| spermidine n1-acetyltransferase | C9115_12930 | Not Available | Positive | 2636316 - 2636876 | 21888.2 |
| ynfc family lipoprotein | C9115_12935 | Not Available | Negative | 2636879 - 2637589 | 26508.3 |
| duf1161 domain-containing protein | C9115_12940 | Not Available | Positive | 2637697 - 2638002 | 10519.3 |
| dimethyl sulfoxide reductase subunit a | C9115_12945 | Not Available | Positive | 2638201 - 2640627 | 89661.8 |
| dimethyl sulfoxide reductase subunit a | C9115_12950 | Not Available | Positive | 2640688 - 2643111 | 89991.0 |
| dimethylsulfoxide reductase | C9115_12955 | Not Available | Positive | 2643122 - 2643739 | 22752.9 |
| dimethyl sulfoxide reductase anchor subunit | C9115_12960 | Not Available | Positive | 2643741 - 2644595 | 30472.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




