Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | C9115_12450 | Not Available | Positive | 2554068 - 2554943 | 31852.5 |
| autoinducer 2-degrading protein lsrg | C9115_12455 | Not Available | Positive | 2554967 - 2555257 | 11269.4 |
| trans-aconitate 2-methyltransferase | C9115_12460 | Not Available | Positive | 2555314 - 2556072 | 29043.6 |
| hypothetical protein | C9115_12465 | Not Available | Negative | 2556076 - 2556990 | 34751.9 |
| tagaturonate reductase | C9115_12470 | Not Available | Negative | 2557197 - 2558648 | 54825.4 |
| diguanylate cyclase | C9115_12475 | Not Available | Negative | 2558875 - 2560293 | 52212.6 |
| duf4186 domain-containing protein | C9115_12480 | Not Available | Negative | 2560432 - 2560791 | 13544.5 |
| glutaminase 2 | C9115_12485 | Not Available | Negative | 2560791 - 2561717 | 33517.6 |
| succinate-semialdehyde dehydrogenase | C9115_12490 | Not Available | Negative | 2561781 - 2563169 | 49603.6 |
| lysr family transcriptional regulator | C9115_12495 | Not Available | Positive | 2563270 - 2564151 | 32423.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




