Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitoxin prlf | C9115_11400 | Not Available | Positive | 2331664 - 2331999 | 12359.7 |
| type ii toxin-antitoxin system yhav family toxin | C9115_11405 | Not Available | Positive | 2331999 - 2332463 | 17808.1 |
| deor family transcriptional regulator | C9115_11410 | Not Available | Negative | 2332518 - 2333327 | 29574.3 |
| pts n-acetylgalactosamine transporter subunit iib | C9115_11420 | Not Available | Positive | 2334869 - 2335342 | 17056.8 |
| pts mannose/fructose/sorbose/n-acetylgalactosamine transporter subunit iic | C9115_11425 | Not Available | Positive | 2335353 - 2336132 | 27350.5 |
| pts mannose/fructose/sorbose transporter family subunit iid | C9115_11430 | Not Available | Positive | 2336122 - 2337000 | 31772.6 |
| pts sugar transporter subunit iia | C9115_11435 | Not Available | Positive | 2337018 - 2337452 | 15513.7 |
| n-acetylglucosamine-6-phosphate deacetylase | C9115_11440 | Not Available | Positive | 2337449 - 2338582 | 40343.8 |
| agas family sugar isomerase | C9115_11445 | Not Available | Positive | 2338933 - 2340087 | 41796.9 |
| tagatose-1,6-bisphosphate aldolase | C9115_11450 | Not Available | Positive | 2340100 - 2340960 | 31295.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




