Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine dehydratase | C9115_11345 | Not Available | Negative | 2319920 - 2320909 | 35234.5 |
| transcriptional regulator tdca | C9115_11350 | Not Available | Negative | 2321008 - 2321946 | 34513.8 |
| dna-binding transcriptional activator tdcr | C9115_11355 | Not Available | Positive | 2322135 - 2322479 | 13552.3 |
| hypothetical protein | C9115_11360 | Not Available | Positive | 2322735 - 2323274 | 20568.6 |
| yhac family protein | C9115_11365 | Not Available | Positive | 2323296 - 2324483 | 45232.3 |
| glycerate 2-kinase | C9115_11375 | Not Available | Negative | 2325287 - 2326432 | 39122.7 |
| 2-hydroxy-3-oxopropionate reductase | C9115_11380 | Not Available | Negative | 2326529 - 2327419 | 30661.6 |
| 2-dehydro-3-deoxyglucarate aldolase | C9115_11385 | Not Available | Negative | 2327449 - 2328219 | 27400.6 |
| galactarate transporter | C9115_11390 | Not Available | Negative | 2328235 - 2329569 | 49012.0 |
| galactarate dehydratase | C9115_11395 | Not Available | Positive | 2329944 - 2331515 | 56330.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




